The mitochondrial genome of the moss Brachythecium rivulare (Hypnales, Brachytheciaceae)

D. V. Goryunov, M. D. Logacheva, M. S. Ignatov, I. A. Milyutina, A. V. Fedorova, A. V. Troitsky

Research output: Contribution to journalArticlepeer-review

Abstract

The mitochondrial genome of the pleurocarpous moss Brachythecium rivulare has been sequenced and annotated. The genome consists of 104,460 base pairs and has approximately the same gene set and organization as other bryophyte mitogenomes. Whole mitochondrial genome comparison between B. rivulare and Physcomitrella patens, Tetraphis pellucida, Anomodon rugelii, and Anomodon attenuatus was performed. The primary cause of bryophyte mitochondrial gene length variation was found to be numerous indels in the introns. Bryophyte mitochondrial gene conservation level was estimated, and it was in a good congruence with the overall phylogeny of bryophytes with the percentage of mitogenome similarity being proportional to the age estimated by phylochronologic analysis. Annotation discrepancies in the analyzed mitogenome sequences were identified. The simple sequence repeat (SSR) content was evaluated, and candidate sites of RNA editing were predicted in the B. rivulare mitochondrial genome.

Original languageEnglish
Pages (from-to)1373-1379
Number of pages7
JournalBiochemistry (Moscow)
Volume82
Issue number11
DOIs
Publication statusPublished - 1 Nov 2017
Externally publishedYes

Keywords

  • Brachythecium rivulare
  • Bryophyta
  • mitochondrial genome
  • mosses

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