Software for analysis of bacterial genomes

A. A. Mironov, N. P. Vinokurova, M. S. Gelfand

Research output: Contribution to journalArticlepeer-review

74 Citations (Scopus)

Abstract

GenomeExplorer is a program for comparative analysis of regulation in prokaryotic genomes. The program has options for signal search, comparison of gene samples, search for paralogs and orthologs, iterative construction of signal profiles. The program has a convenient graphic interface, allowing for navigation in the annotation window, in the genome map, and in the table of gene similarities. The use of the system clipboard allows one to export the results of analysis into Word and Excel, and to call external programs via the Internet.

Original languageEnglish
Pages (from-to)222-231
Number of pages10
JournalMolecular Biology
Volume34
Issue number2
DOIs
Publication statusPublished - 2000
Externally publishedYes

Keywords

  • Computer analysis
  • Operator
  • Regulation
  • Transcription
  • Translation

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