MRI brain imagery processing software in data analysis

Alexander Bernstein, Akzhigitov Renat, Ekaterina Kondrateva, Svetlana Sushchinskaya, Irina Samotaeva, Vladislav Gaskin

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Citations (Scopus)

    Abstract

    Modern brain scanning techniques are one of the most consistent sources of medical information which included in most diagnostic protocols. These data possess a great potential for the machine learning (ML) analysis and clinical applications of the results. MRI imaging is prevalent in brain analysis, allowing acquisition of structural (3D image) and functional imaging (timeseries of 3D images). Relative to the MRI data volumes these research are considered to the big data and massive analysis, connected with numerous methods of signal processing, advanced ML approaches and feature extraction. In current paper we update the surveys of most software used for the feature generation, processing and analysis of MRI brain imagery. Systematizing the toolboxes, we describe common scanner characteristics, image modalities, corresponding features and their informational context, as well as common machine learning classification problems in working with the data. And as a result, we propose evaluation and comparison of conventional software tools with their detailed description.

    Original languageEnglish
    Title of host publicationAdvances in Mass Data Analysis of Images and Signals with Applications in Medicine, r/g/b Biotechnology, Food Industries, Dietetics, Biometry and Security, Agriculture, Drug Discover, and System Biology - 13th International Conference, MDA 2018, Proceedings
    EditorsPetra Perner
    Publisheribai-publishing
    Pages60-74
    Number of pages15
    ISBN (Electronic)9783942952590
    Publication statusPublished - 2018
    Event13th International Conference on Mass Data Analysis of Signals and Images with Applications in Medicine, r/g/b Biotechnology, Food Industries and Dietetics, Biometry and Security, and Agriculture, MDA 2018 - New York, United States
    Duration: 7 Jul 201810 Jul 2018

    Publication series

    NameAdvances in Mass Data Analysis of Images and Signals with Applications in Medicine, r/g/b Biotechnology, Food Industries, Dietetics, Biometry and Security, Agriculture, Drug Discover, and System Biology - 13th International Conference, MDA 2018, Proceedings

    Conference

    Conference13th International Conference on Mass Data Analysis of Signals and Images with Applications in Medicine, r/g/b Biotechnology, Food Industries and Dietetics, Biometry and Security, and Agriculture, MDA 2018
    Country/TerritoryUnited States
    CityNew York
    Period7/07/1810/07/18

    Keywords

    • Classification
    • Machine learning
    • MRI Software Packages
    • MRI toolbox
    • Neuroscience
    • Prepro-cessing

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