Bioinformatics analysis of the genome of Geobacillus stearothermophilus 22 Strain isolated from the Garga hot spring, Baikal Region

A. S. Rozanov, T. V. Ivanisenko, A. V. Bryanskaya, S. V. Shekhovtsov, M. D. Logacheva, O. V. Saik, T. K. Malup, P. S. Demenkov, T. N. Goryachkovskaya, V. A. Ivanisenko, S. E. Peltek

Research output: Contribution to journalArticlepeer-review

2 Citations (Scopus)

Abstract

A new strain, Geobacillus stearothermophilus 22, was isolated from the Garga hot spring in the Bargusin Valley, Baikal Region, Russia. The morphology and biochemistry of the strain were analyzed, and full genome sequencing was conducted. The sequence was subjected to bioinformatics analysis. The nucleotide sequences (contigs) of the strain were found to be similar to the genome of the thermophilic strain G. kaustophilus Y412MC52. The proteome of the new strain was analyzed. Enzymes that belong to hemicellulases (endoxylanase, beta-xylosidase, and arabinofuranosidase) and the endocellulase enzyme were detected.

Original languageEnglish
Pages (from-to)267-272
Number of pages6
JournalRussian Journal of Genetics: Applied Research
Volume4
Issue number4
DOIs
Publication statusPublished - Jul 2014
Externally publishedYes

Keywords

  • bioinformatics analysis
  • full genome sequencing
  • Geobacillus
  • thermophile

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